Version 1.3 -fixed a bug that allow LB score index to be calculated for trees with a taxon name occuring twice in the tree, these results are not correct Version 1.2 -fixed major bug concerning function b (a posteriori) screening in that the most inclusive pair of parentheses (the most outer ones on each side) is not used -changed the setting from a strict congruence in the a posteriori screening for bootstrap support to a relaxed setting. In the strict setting all taxa of a clade of interest, which are present in the tree, had also to be present in a detected clade of potential paralogy. In the relaxed setting this is not the case anymore. Now the detected clade of potential clade has only to comprise taxa from the pre-defined clade of interest, but not all taxa of this clade. This means, that other taxa of this clade can also be present outside the detected clade in the tree. Therefore, it is advisable to combine this search strategy with the option -gts predefining groups with a priori evidence of monophyly for such subclades in the clade of interest to minimize the number of instances to be further analyzed. -fixed bug concerning trees with posterior probabilities in the LB score and saturation calculations -fixed a bug concerning asking for the bpf-file despite a WRST test is not used Version 1.1 -included run time measurement -fixed minor bug in fun h for checking of nper option and in fun j for checking the ori option -fixed major bug concerning compatibility with some Linux versions